This list is no longer being updated.

All data generated by the TCGA Research Network are open to the public through the Genomic Data Commons (GDC).

Below are examples of publications that leverage TCGA data in various ways.

    Banerjee, R., Russo, N., Liu, M., Basrur, V., Bellile, E., Palanisamy, N., Scanlon, C.S., van Tubergen, E., Inglehard, R.C., et al. (2014) TRIP13 promotes error-prone nonhomologous end joining and induces chemoresistance in head and neck cancer. Nat Commun. doi:10.1038/ncomms5527. View PubMed abstract.
    Bracken, C.P., Li, X., Wright, J.A., Lawrence, D., Pillman, K.A., Salmanidis, M., Anderson, M.A., Dredge, B.K., Gregory, P.A., et al. (2014) Genome-wide identification of miR‐200 targets reveals a regulatory network controlling cell invasion . EMBO J. doi: 10.15252/embj.201488641. View PubMed abstract.
    Achari, C., Winslow, S., Ceder, Y., Larsson, C. (2014) Expression of miR-34c induces G2/M cell cycle arrest in breast cancer cells. BMC Cancer. doi: 10.1186/1471-2407-14-538. Read the full article.
    Endesfelder, D., Burrell, R., Kanu, N., McGranahan, N., Howell, M., Parker, P.J., Downward, J., Swanton, C., and Kschischo, M. (2014) Chromosomal instability selects gene copy number variants encoding core regulators of proliferation in ER+ breast cancer. Cancer Res. doi: 10.1158/0008-5472.CAN-13-2664. View PubMed abstract.
    Hsu, Y.H., Yao, J., Chan, L.C., Wu, T.J., Hsu, J.L., Fang, Y.F., Wei, Y., Wu, Y., Huang, W.C., Liu, C.L., et al. (2014) Definition of PKC-α, CDK6 and MET as therapeutic targets in triple-negative breast cancer. Cancer Res. doi:10.1158/0008-5472.CAN-14-0584 . View PubMed abstract.
    Kim, Y., and Kumar, S. (2014) CD44-mediated adhesion to hyaluronic acid contributes to mechanosensing and invasive motility. Mol Cancer Res. doi: 10.1158/1541-7786.MCR-13-0629. View PubMed abstract.
    Yu, J., Wu, W.K., Li, X., He, J., Li, X.X., Ng, S.S., Yu, C., Gao, Z., Yang, J., Li, M., et al. (2014) Novel recurrently mutated genes and a prognostic mutation signature in colorectal cancer. Gut. doi: 10.1136/gutjnl-2013-306620. Read the full article.
    Hedditch, E.L., Gao, B., Russell, A.J., Lu, Y., Emmanuel, C., Beesley, J., Johnatty, S.E., Chen, X., Harnett, P., George, J., et al. (2014) ABCA transporter gene expression and poor outcome in epithelial ovarian cancer. J Natl Cancer Inst. 106(7):dju149. View PubMed abstract.
    Yuan, Y., Van Allen, E.M., Omberg, L., Wagle, N., Amin-Mansour, A., Sokolov, A., Byers, L.A., Xu, Y., Hess, K.R., Diao, L., et al. (2014) Assessing the clinical utility of cancer genomic and proteomic data across tumor types. Nat Biotechnol. doi: 10.1038/nbt.2940. View PubMed abstract.
    Cheng, F., Jia, P., Wang, Q., Lin, C.C., Li, W.H., and Zhao, Z. (2014) Studying tumorigenesis through network evolution and somatic mutational perturbations in the cancer interactome. Mol Biol Evol. doi: 10.1093/molbev/msu167. View PubMed abstract.
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