• National Cancer Institute
  • National Human Genome Research Institute

PublicationsRSS

All data generated by The Cancer Genome Atlas (TCGA) Research Network are made open to the public through the Data Coordinating Center and the TCGA Data Portal. The following is a growing list of publications from the TCGA Research Network (designated with an *) and from other investigators who have successfully leveraged the TCGA data for their own work.


    Guo, J., Chen, X., Xi, R., Chang, Y., Zhang, X., and Zhang, X. (2014) AEG-1 expression correlates with CD133 and PPP6c levels in human glioma tissues. J Biomed Res. doi: 10.7555/JBR.28.20140015. Read the full article.
    Wilks, C., Cline, M.S., Weiler, E., Diehkans, M., Craft, B., Martin, C., Murphy, D., Pierce, H., Black, J., et al. (2014) The Cancer Genomics Hub (CGHub): overcoming cancer through the power of torrential data. Database (Oxford). doi: 10.1093/database/bau093. Read the full article.
    Zhan, C., Yan, L., Wang, L., Jiang, W., Zhang, Y., Xi, J., Chen, L., Jin, Y., Qiao, Y., et al. (2014) Identification of reference miRNAs in human tumors by TCGA miRNA-seq data. Biochem Biophys Res Commun. doi: 10.1016/j.bbrc.2014.09.086. View PubMed abstract.
    Li, J., Taich, Z.J., Goyal, A., Gonda, D., Akers, J., Adhikari, B., Patel, K., Vandenberg, S., Yan, W., et al. (2014) Epigenetic suppression of EGFR signaling in G-CIMP+ glioblastomas. Oncotarget. 5(17):7342-7356. View PubMed abstract.
    Barrio-Real, L., Benedetti, L.G., Engel, N., Tu, Y., Cho, S., Sukumar, S. and Kazanietz, M.G. (2014) Subtype-specific overexpression of the Rac-GEF P-REX1 in breast cancer is associated with promoter hypomethylation. Breast Cancer Res Treat. doi:10.1186/s13058-014-0441-7. Read the full article.
    Phipson, B. and Oshlack, A. (2014) DiffVar: a new method for detecting differential variability with application to methylation in cancer and aging. Genome Biol. doi:10.1186/s13059-014-0465-4. Read the full article.
    Yang, S., Jia, Y., Liu, X., Winters, C., Wang, X., Zhang, Y., Devor, E.J., Hovey, A.M., Reyes, H.D., Xiao, X., et al. (2014) Systematic dissection of the mechanisms underlying progesterone receptor downregulation in endometrial cancer. Oncotarget. 5. Read the full article.
    Zhou, X., Xue, P., Yang, M., Shi, H., Lu, D., Wang, Z., Shi, Q., Hu, J., Xie, S., et al. (2014) Protein kinase D2 promotes the proliferation of glioma cells by regulating Golgi phosphoprotein 3. Cancer Lett. doi: 10.1016/j.canlet.2014.09.008. View PubMed abstract.
    Li, J., Kurasawa, Y., Wang, Y., Clise-Dwyer, K., Klumpp, S.A., Liang, H., Tailor, R.C., Raymond, A.C., Estrov, Z., et al. (2014) Requirement for Ssbp3 in hematoppoietic stem cell maintenance and stress response. J Immunol. doi:10.4049/​jimmunol.1300337. View PubMed abstract.
    Zhou, H., Mohamedali, K.A., Gonzalez-Angulo, A.M., Cao, Y., Migliorini, M., Cheung, L.H., LoBello, J., Lei, X., Qi, Y., et al (2014) Development of human serine protease-based therapeutics targeting Fn14 and identification of Fn14 as a new target overxpressed in TNBC. Mol Cancer Ther. doi:10.1158/1535-7163.MCT-14-0346. View PubMed abstract.
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