• National Cancer Institute
  • National Human Genome Research Institute

PublicationsRSS

All data generated by The Cancer Genome Atlas (TCGA) Research Network are made open to the public through the Data Coordinating Center and the TCGA Data Portal. The following is a growing list of publications from the TCGA Research Network (designated with an *) and from other investigators who have successfully leveraged the TCGA data for their own work.


    Osmanbeyoglu, H.U., Pelossof, R., Bromberg, J. and Leslie, C.S. (2014) Linking signaling pathways to transcriptional programs in breast cancer. Genome Res. doi:10.1101/gr.173039.114. Read the full article.
    Zhous, J., Deng, Z., Chen, Y., Gao, Y., Wu, D., Zhu, G., Li, L., Song, W., Wang, X., et al (2014) Overexpression of FABP7 promotes cell growth and predicts poor prognosis of clear cell renal cell carcinoma. Urol Oncol. doi: 10.1016/j.urolonc.2014.08.001. Read the full article.
    Zhang, K., Jones, L., Lim, S., Maher, C.A., Adkins, D., Lewis, J., Kimple, R.J., Fertig, E.J., Chung, C.H., et al. (2014) Loss of Trop2 causes ErbB3 activation through a neuregulin-1-dependent mechanism in the mesenchymal subtype of HNSCC. Oncotarget. 5. Read the full article.
    Budinska, E., Popovici, V., Tejpar, S., D'Ario, G., Lapique, N., Sikora, K.O., Di Narzo, A.F., Yan, P., Hodgson, J.G., Weinrich, S., et al. (2014) Gene expression patterns unveil a new level of molecular heterogeneity in colorectal cancer. J Pathol. 231(1):63-76. Read the full article.
    Zhi, H., Ning, S., Li, X., Li, Y., Wu, W. and Li, X. (2014) A novel reannotation strategy for dissecting DNA methylation patterns of human long intergenic non-coding RNAs in cancers. Nucleic Acids. doi:  10.1093/nar/gku575. Read the full article.
    Liu, X.S., Haines, J.E., Mehanna, E.K., Genet, M.D., Ben-Sahra, I., Asara, J.M., Manning, B.D. and Yuan, Z.M. (2014) ZBTB7A acts as a tumor suppressor through the transcriptional repression of glycolysis. Genes Dev. doi: 10.1101/gad.245910.114. View PubMed abstract.
    Marchi, E., Kanapin, A., Magiorkinis, G. and Belshaw, R. (2014) Unfixed endogenous retrovircal insertions in the human population. J Virol. doi:  10.1128/JVI.00919-14. Read the full article.
    Amarasinghe, K.C., Li, J., Hunter, S.M., Ryland, G.L., Cowin, P.A., Campbell, I.G. and Halgamuge, S.K. (2014) Inferring copy number and genotype in tumour exome data. BMC Genomics. doi: 10.1186/1471-2164-15-732. Read the full article.
    Ali, H., Rueda, O.M., Chin, S.F., Curtis, C., Dunning, M.J., Aparicio, S. and Caldas, C. (2014) Genome-driven integrated classification of breast cancer validated in over 7,500 samples. Genome Biol. doi:10.1186/s13059-014-0431-1. Read the full article.
    Eder, K. and Kalman, B. (2014) Molecular hereogeneity of glioblastoma and its clinical relevance. Pathol Oncol Res. doi: 10.1007/s12253-014-9833-3. Read the full article.
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