• National Cancer Institute
  • National Human Genome Research Institute

PublicationsRSS

All data generated by The Cancer Genome Atlas (TCGA) Research Network are made open to the public through the Data Coordinating Center and the TCGA Data Portal. The following is a growing list of publications from the TCGA Research Network (designated with an *) and from other investigators who have successfully leveraged the TCGA data for their own work.


    Brooks SA, Brannon AR, Parker JS, Fisher JC, Sen O, Kattan MW, Hakimi AA, Hsieh JJ, Choueiri TK, Tamboli P, et al. (2014) ClearCode34: a prognostic risk predictor for localized clear cell renal cell carcinoma. Eur Urol. doi: 10.1016/j.eururo.2014.02.035. View PubMed abstract.
    Kim, Y.W., Kim, E.Y., Jeon, D., Liu, J.L., Kim, H.S., Choi, J.W., and Ahn, W.S. (2014) Differential microRNA expression signatures and cell type-specific association with Taxol resistance in ovarian cancer cells. Drug Des Devel Ther. 8:293-314. Read the full article.
    Lai, R.K., Chen, Y., Guan, X., Nousome, D., Sharma, C., Canoll, P., Bruce, J., Sloan, A.E., Cortes, E., Vonsattel, J.P., et al. (2014) Genome-wide methylation analyses in glioblastoma multiforme. PLoS One. 9(2):e89376. Read the full article.
    Kim, D., Shin, H., Sohn, K.A., Verma, A., Ritchie, M.D., and Kim, J.H. (2014) Incorporating inter-relationships between different levels of genomic data into cancer clinical outcome prediction. Methods. doi: 10.1016/j.ymeth.2014.02.003. View PubMed abstract.
    Zovoilis, A., Mungall, A.J., Moore, R., Varhol, R., Chu, A., Wong, T., Marra, M., and Jones, S.J. (2014) The expression level of small non-coding RNAs derived from the first exon of protein-coding genes is predictive of cancer status. EMBO Rep. doi: 10.1002/embr.201337950. View PubMed abstract.
    Li, H., Chiappinelli, K.B., Guzzetta, A.A., Easwaran, H., Yen, R.W., Vatapalli, R., Topper, M.J., Luo, J., Connolly, R.M., Azad, N.S., et al. (2014) Immune regulation by low doses of the DNA methyltransferase inhibitor 5-azacitidine in common human epithelial cancers. Oncotarget. 5(3):587-598. Read the full article.
    Janbazian, L., Karamchandani, J., and Das, S. (2014) Mouse models of glioblastoma: lessons learned and questions to be answered. J Neurooncol. doi: 10.1007/s11060-014-1401-x. View PubMed abstract.
    Ippolito, J.E., and Piwnica-Worms, D. (2014) A fluorescence-coupled assay for gamma aminobutyric acid (GABA) reveals metabolic stress-induced modulation of GABA content in neuroendocrine cancer. PLoS One. 9(2):e88667e88667. Read the full article.
    Shi, Y., Chen, C., Zhang, X., Liu, Q., Xu, J.L., Zhang, H.R., Yao, X.H., Jiang, T., He, Z.C., Ren, Y., et al. (2014) Primate-specific miR-663 functions as a tumor suppressor by targeting PIK3CD and predicts the prognosis of human glioblastoma. Clin Cancer Res. doi:10.1158/1078-0432.CCR-13-2284. Read the full article.
    Blancato, J., Graves, A., Rashidi, B., Moroni, M., Tchobe, L., Ozdemirli, M., Kallakury, B., Makambi, K.H., Marian, C., and Mueller, S.C. (2014) SYK allelic loss and the role of Syk-regulated genes in breast cancer survival. PLoS One. 9(2):e87610. Read the full article.
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