• National Cancer Institute
  • National Human Genome Research Institute


All data generated by The Cancer Genome Atlas (TCGA) Research Network are made open to the public through the Data Coordinating Center and the TCGA Data Portal. The following is a growing list of publications from the TCGA Research Network (designated with an *) and from other investigators who have successfully leveraged the TCGA data for their own work.

    Schuster, K., Venkateswaran, N., Rabellino, A., Girard, L., Pena-Llopis, S., and Scaglioni, P.P. (2014) Nullifying the CDKN2A/B locus promotes mutant K-ras lung tumorigenesis. Mol Cancer Res. doi: 10.1158/1541-7786.MCR-13-0620-T. View PubMed abstract.
    Li, Y., Liang, C., Wong, K.C., Jin, K., and Zhang, Z. (2014) Inferring probabilistic miRNA-mRNA interaction signatures in cancers: a role-switch approach. Nucleic Acids Res. doi: 10.1093/nar/gku182. Read the full article.
    An, O., Pendino, V., D'Antonio, M., Ratti, E., Gentilini, M., and Ciccarelli, F.D. (2014) NCG 4.0: the network of cancer genes in the era of massive mutational screenings of cancer genomes. Database (Oxford). 2014(0):bau015. Read the full article.
    Pietras, A., Katz, A.M., Ekström, E.J., Wee, B., Halliday, J.J., Pitter, K.L., Werbeck, J.L., Amankulor, N.M., Huse, J.T., and Holland, E.C. (2014) Osteopontin-CD44 signaling in the glioma perivascular niche enhances cancer stem cell phenotypes and promotes aggressive tumor growth. Cell Stem Cell. 14(3):357-369. View PubMed abstract.
    Ostrow, S.L., Barshir, R., Degregori, J., Yeger-Lotem, E., and Hershberg, R. (2014) Cancer evolution is associated with pervasive positive selection on globally expressed genes. PLoS Genet. 10(3):e1004239. Read the full article.
    Xu, J., Wang, J., Hu, Y., Qian, J., Xu, B., Chen, H., Zou, W., and Fang, J.Y. (2014) Unequal prognostic potentials of p53 gain-of-function mutations in human cancers associate with drug-metabolizing activity. Cell Death Dis. 5:e1108. Read the full article.
    Martinez, V.D., Vucic, E.A., Thu, K.L., Pikor, L.A., Lam, S., and Lam, W.L. (2014) Disruption of KEAP1/CUL3/RBX1 E3-ubiquitin ligase complex components by multiple genetic mechanisms is associated with poor prognosis in head and neck cancer. Head Neck. doi: 10.1002/hed.23663. View PubMed abstract.
    Feigin, M.E., Xue, B., Hammell, M.C., and Muthuswamy, S.K. (2014) G-protein-coupled receptor GPR161 is overexpressed in breast cancer and is a promoter of cell proliferation and invasion. Proc Natl Acad Sci U S A. doi: 10.1073/pnas.1320239111. View PubMed abstract.
    Lis, R., Touboul, C., Halabi, N.M., Madduri, A.S., Querleu, D., Mezey, J., Malek, J.A., Suhre, K., and Rafii, A. (2014) Mesenchymal cell interaction with ovarian cancer cells induces a background dependent pro-metastatic transcriptomic profile. J Transl Med. 12(1):59. Read the full article.
    Klco JM, Spencer DH, Miller CA, Griffith M, Lamprecht TL, O'Laughlin M, Fronick C, Magrini V, Demeter RT, Fulton RS, et al. (2014) Functional heterogeneity of genetically defined subclones in acute myeloid leukemia. Cancer Cell. doi: 10.1016/j.ccr.2014.01.031. .
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