• National Cancer Institute
  • National Human Genome Research Institute

PublicationsRSS

All data generated by The Cancer Genome Atlas (TCGA) Research Network are made open to the public through the Data Coordinating Center and the TCGA Data Portal. The following is a growing list of publications from the TCGA Research Network (designated with an *) and from other investigators who have successfully leveraged the TCGA data for their own work.


    Castilla, M.A., López-García, M.A., Atienza, M.R., Rosa-Rosa, J.M., Díaz-Martín, J., Pecero, M.L., Vieites, B., Romero-Pérez, L., Benítez, J., Calcabrini, A., et al. (2014) Vgll1 expression is associated with a triple-negative basal-like phenotype in breast cancer. Endocr Relat Cancer. doi: 10.1530/ERC-13-0485. View PubMed abstract.
    Colen, R.R., Vangel, M., Wang, J., Gutman, D.A., Hwang, S.N., Wintermark, M., Jain, R., Jilwan-Nicolas, M., Chen, J.Y., Raghavan, P., et al. (2014) Imaging genomic mapping of an invasive MRI phenotype predicts patient outcome and metabolic dysfunction: a TCGA glioma phenotype research group project. BMC Med Genomics. 7(1):30. Read the full article.
    Cheng, F., Jia, P., Wang, Q., Lin, C.C., Li, W.H., and Zhao, Z. (2014) Studying tumorigenesis through network evolution and somatic mutational perturbations in the cancer interactome. Mol Biol Evol. doi: 10.1093/molbev/msu167. View PubMed abstract.
    Ow, G.S., Ivshina, A.V., Fuentes, G., and Kuznetsov, V.A. (2014) Identification of two poorly prognosed ovarian carcinoma subtypes associated with CHEK2 germ-line mutation and non-CHEK2 somatic mutation gene signatures. Cell Cycle. 13(14):. Read the full article.
    Akbani, R., Ng, P.K., Werner, H.M., Shahmoradgoli, M., Zhang, F., Ju, Z., Liu, W., Yang, J.Y., Yoshihara, K., Li, J., et al. (2014) A pan-cancer proteomic perspective on The Cancer Genome Atlas. Nat Commun. 5:3887. View PubMed abstract.
    Pickering, C.R., Zhang, J., Neskey, D.M., Zhao, M., Jasser, S.A., Wang, J., Ward, A., Tsai, C.J., Ortega Alves, M.V., Zhou, J.H., et al. (2014) Squamous cell carcinoma of the oral tongue in young non-smokers is genomically similar to tumors in older smokers. Clin Cancer Res. doi: 10.1158/1078-0432.CCR-14-0565. View PubMed abstract.
    Xiong, J., Bing, Z., Su, Y., Deng, D., and Peng, X. (2014) An integrated mRNA and microRNA expression signature for glioblastoma multiforme prognosis. PLoS One. 9(5):e98419. Read the full article.
    Bavarva, J.H., Tae, H., McIver, L., and Garner, H.R. (2014) Nicotine and oxidative stress induced exomic variations are concordant and overrepresented in cancer-associated genes. Oncotarget. 5(2014):n. pag. Web. Read the full article.
    Grieb, B.C., Chen, X., and Eischen, C.M. (2014) MTBP is over-expressed in triple negative breast cancer and contributes to its growth and survival. Mol Cancer Res. doi:10.1158/1541-7786.MCR-14-0069 . View PubMed abstract.
    Chen, L., Voronovich, Z., Clark, K., Hands, I., Mannas, J., Walsh, M., Nikiforova, M.N., Durbin, E.B., Weiss, H., and Horbinski, C. (2014) Predicting the likelihood of an isocitrate dehydrogenase 1 or 2 mutation in diagnoses of infiltrative glioma. Neuro Oncol. doi: 10.1093/neuonc/nou097. View PubMed abstract.
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