• National Cancer Institute
  • National Human Genome Research Institute


All data generated by The Cancer Genome Atlas (TCGA) Research Network are made open to the public through the Data Coordinating Center and the TCGA Data Portal. The following is a growing list of publications from the TCGA Research Network (designated with an *) and from other investigators who have successfully leveraged the TCGA data for their own work.

    Gerber, N.K., Goenka, A., Turcan, S., Reyngold, M., Makarov, V., Kannan, K., Beal, K., Omuro, A., Yamada, Y., Gutin, P., et al. (2014) Transcriptional diversity of long-term glioblastoma survivors. Neuro Oncol. doi: 10.1093/neuonc/nou043. View PubMed abstract.
    Kim, J., Lee, Y., Cho, H.J., Lee, Y.E., An, J., Cho, G.H., Ko, Y.H., Joo, K.M., and Nam, D.H. (2014) NTRK1 fusion in glioblastoma multiforme. PLoS One. 9(3):e91940. Read the full article.
    Wang, C., Machiraju, R., and Huang, K. (2014) Breast cancer patient stratification using a molecular regularized consensus clustering method. Methods. doi: 10.1016/j.ymeth.2014.03.005. View PubMed abstract.
    McCloskey, C.W., Goldberg, R.L., Carter, L.E., Gamwell, L.F., Al-Hujaily, E.M., Collins, O., Macdonald, E.A., Garson, K., Daneshmand, M., Carmona, E., et al. (2014) A new spontaneously transformed syngeneic model of high-grade serous ovarian cancer with a tumor-initiating cell population. Front Oncol. 4:53. Read the full article.
    Sonabend, A.M., Carminucci, A.S., Amendolara, B., Bansal, M., Leung, R., Lei, L., Realubit, R., Li, H., Karan, C., Yun, J., et al. (2014) Convection-enhanced delivery of etoposide is effective against murine proneural glioblastoma. Neuro Oncol. doi: 10.1093/neuonc/nou026. .
    Feng, Y., Wang, Z., Bao, Z., Yan, W., You, G., Wang, Y., Hu, H., Zhang, W., Zhang, Q., and Jiang, T. (2014) SOCS3 promoter hypermethylation is a favorable prognosticator and a novel indicator for G-CIMP-positive GBM patients. PLoS One. 9(3):e91829. Read the full article.
    Aksoy, B.A., Demir, E., Babur, O., Wang, W., Jing, X., Schultz, N., and Sander, C. (2014) Prediction of individualized therapeutic vulnerabilities in cancer from genomic profiles. Bioinformatics. doi: 10.1093/bioinformatics/btu164. Read the full article.
    Wentzensen, N., Bakkum-Gamez, J.N., Killian, J.K., Sampson, J., Guido, R., Glass, A., Adams, L., Luhn, P., Brinton, L.A., Rush, B., et al. (2014) Discovery and validation of methylation markers for endometrial cancer. Int J Cancer. doi: 10.1002/ijc.28843. View PubMed abstract.
    Zhao, Q., Shi, X., Xie, Y., Huang, J., Shia, B., and Ma, S. (2014) Combining multidimensional genomic measurements for predicting cancer prognosis: observations from TCGA. Brief Bioinform. doi: 10.1093/bib/bbu003. View PubMed abstract.
    Dews, M., Tan, G.S., Hultine, S., Raman, P., Choi, J., Duperret, E.K., Lawler, J., Bass, A., and Thomas-Tikhonenko, A. (2014) Masking epistasis between MYC and TGF-β pathways in antiangiogenesis-mediated colon cancer suppression. J Natl Cancer Inst. doi: 10.1093/jnci/dju043. View PubMed abstract.
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