• National Cancer Institute
  • National Human Genome Research Institute


All data generated by The Cancer Genome Atlas (TCGA) Research Network are made open to the public through the Data Coordinating Center and the TCGA Data Portal. The following is a growing list of publications from the TCGA Research Network (designated with an *) and from other investigators who have successfully leveraged the TCGA data for their own work.

    Liu, D., Xiong, H., Ellis, A.E., Northrup, N.C., Rodriguez, C.O., O'Regan, R.M., Dalton, S. and Zhao, S. (2014) Molecular homology and difference between spontaneous canine mammary cancer and human breast cancer. Cancer Res. doi: 10.1158/0008-5472. View PubMed abstract.
    Hou, J.P. and Ma, J. (2014) DawnRank: discovering personalized driver genes in cancer. Genome Med. doi: 10.1186/s13073-014-0056-8. Read the full article.
    Banerjee, R., Russo, N., Liu, M., Basrur, V., Bellile, E., Palanisamy, N., Scanlon, C.S., van Tubergen, E., Inglehard, R.C., et al. (2014) TRIP13 promotes error-prone nonhomologous end joining and induces chemoresistance in head and neck cancer. Nat Commun. doi:10.1038/ncomms5527. View PubMed abstract.
    Xu, C., Ping, Y., Li, X., Zhao, H., Wang, L., Fan, H., Xiao, Y. and Li, X. (2014) Prioritizing candidate disease miRNAs by integrating phenotype associations of multiple diseases with matched miRNA and mRNA expression profiles . Mol Biosyst. doi: 10.1039/C4MB00353E. View PubMed abstract.
    Dellinger, A. E., Nixon, A. B. and Pang, H. (2014) Integrative Pathway Analysis Using Graph-Based Learning with Applications to TCGA Colon and Ovarian Data. Cancer Informatics. 13(Suppl. 4):1-9. Read the full article.
    Pathiraja, T.N., Thakkar, K.N., Jiang, S., Stratton, S., Liu, Z., Gagea, M., Shi, X., Shah, P.K., Phan, L., et al. (2014) TRIM24 links glucose metabolism with transformation of human mammary epithelial cells. Oncogene. doi: 10.1038/onc.2014.220. View PubMed abstract.
    Krutilina, R., Sun, W., Sethuraman, A., Brown, M., Seagroves, T.N., Pfeffer, L.M., Ignatova, T. and Fan, M. (2014) MicroRNA-18a inhibits hypoxia-inducible factor 1-alpha activity and lung metastasis in basal breast cancers . Breast Cancer Res. doi:10.1186/bcr3693. Read the full article.
    Dellinger, A.E., Nixon, A.B. and Pang, H. (2014) Integrative pathway analysis using graph-based learning with applications to TCGA colon and ovarian data. Cancer Inform. doi: 10.4137/CIN.S13634. Read the full article.
    Bracken, C.P., Li, X., Wright, J.A., Lawrence, D., Pillman, K.A., Salmanidis, M., Anderson, M.A., Dredge, B.K., Gregory, P.A., et al. (2014) Genome-wide identification of miR‐200 targets reveals a regulatory network controlling cell invasion . EMBO J. doi: 10.15252/embj.201488641. View PubMed abstract.
    Achari, C., Winslow, S., Ceder, Y. and Larsson, C. (2014) Expression of miR-34c induces G2/M cell cycle arrest in breast cancer cells. BMC Cancer. doi: 10.1186/1471-2407-14-538. Read the full article.
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