• National Cancer Institute
  • National Human Genome Research Institute


All data generated by The Cancer Genome Atlas (TCGA) Research Network are made open to the public through the Data Coordinating Center and the TCGA Data Portal. The following is a growing list of publications from the TCGA Research Network (designated with an *) and from other investigators who have successfully leveraged the TCGA data for their own work.

    Gill, B.J., Pisapia, D.J., Malone, H.R., Goldstein, H., Lei, L., Sonabend, A., Yun, J., Samanamud, J., Sims, J.S., et al. (2014) MRI-localized biopsies reveal subtype-specific differences in molecular and cellular composition at the margins of glioblastoma. Proc Natl Acad Sci U.S.A.. doi: 10.1073/pnas.1405839111. View PubMed abstract.
    Salazar, C., Nagadia, R., Pandit, P., Cooper-White, J., Banerjee, N., Dimitrova, N., Coman, W.B. and Punyadeera, C. (2014) A novel saliva-based microRNA biomarker panel to detect head and neck cancers. Cell Oncol (Dordr). doi: 10.1007/s13402-014-0188-2. Read the full article.
    Fleischer, T., Frigessi, A., Johnson, K.C., Edvardson, H., Touleimat, N., Klajic, J., Riis, M., Haakensen, V.D., Warnberg, F., Naume, B., et al. (2014) Genome-wide DNA methylation profiles in progression to in situ and invasive carcinoma of the breast with impact on gene transcription and prognosis. Genome Biol. doi:10.1186/s13059-014-0435-x. Read the full article.
    Zheng, Y.R., Kang, K. and Wang, J.J. (2014) A sub-pathway based method to identify candidate drugs for glioblastomas. Med Oncol. doi: 10.1007/s12032-014-0182-6. Read the full article.
    Tian, R., Basu, M.K. and Capriotti, E. (2014) ContrastRank: a new method for ranking putative cancer driver genes and classification of tumor samples. Bioinformatics. doi: 10.1093/bioinformatics/btu466. Read the full article.
    Lu, X., Ye, K., Zou, K. and Chen, J. (2014) Identification of copy number variation-driven genes for liver cancer via bioinformatics analysis. Oncol Rep. doi: 10.3892/or.2014.3425. Read the full article.
    Wang, L., Xiao, Y., Ping, Y., Li, J., Zhao, H., Li, F., Hu, J., Zhang, H., Deng, Y., Tian, J., et al. (2014) Integrating multi-omics for uncovering the architectures of cross-talking pathways in breast cancer. PLoS One. 10.1371/journal.pone.0104282. Read the full article.
    Mikheev, A.M., Mikheeva, S.A., Trister, A.D., Tokita, M.J., Emerson, S.N., Parada, C.A., Born, D.E., Carnemolla, B., Frankel, S., Kim, D.H., et al. (2014) Periostin is a novel therapeutic target that predicts and regulates glioma malignancy. Neuro Oncol. doi: 10.1093/neuonc/nou161. View PubMed abstract.
    Liu, Y., Gilbert, M.R., Kyprianou, N., Rangenekar, V.M. and Horbinski, C. (2014) The tumor suppressor prostate apoptosis response-4 (Par-4) is regulated by mutant IDH1 and kills glioma stem cells. Acta Neuropathol. doi: 10.1007/s00401-014-1334-7. View PubMed abstract.
    Prat, A., Carey, L.A., Adamo, B., Vidal, M., Tabernero, J., Cortes, J., Parker, J.S., Perou, C.M. and Baselga, J. (2014) Molecular features and survival outcomes of the intrinsic subtypes within HER2-positive breast cancer. J Natl Cancer Inst. doi: 10.1093/jnci/dju152. Read the full article.
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