• National Cancer Institute
  • National Human Genome Research Institute


All data generated by The Cancer Genome Atlas (TCGA) Research Network are made open to the public through the Data Coordinating Center and the TCGA Data Portal. The following is a growing list of publications from the TCGA Research Network (designated with an *) and from other investigators who have successfully leveraged the TCGA data for their own work.

    Chan, J.K., Kiet, T.K., Blansit, K., Ramasubbaiah, R., Hilton, J.F., Kapp, D.S., and Matei, D.E. (2014) MiR-378 as a biomarker for response to anti-angiogenic treatment in ovarian cancer. Gynecol Oncol. doi: 10.1016/j.ygyno.2014.03.564. View PubMed abstract.
    Onken, M.D., Winkler, A.E., Kanchi, K.L., Chalivendra, V., Law, J.H., Rickert, C.G., Kallogjeri, D., Judd, N.P., Dunn, G.P., Piccirillo, J.F., et al. (2014) A surprising cross-species conservation in the genomic landscape of mouse and human oral cancer identifies a transcriptional signature predicting metastatic disease. Clin Cancer Res. doi: 10.1158/1078-0432.CCR-14-0205. Read the full article.
    Wu, T.J., Shamsaddini, A., Pan, Y., Smith, K., Crichton, D.J., Simonyan, V., and Mazumder, R. (2014) A framework for organizing cancer-related variations from existing databases, publications and NGS data using a High-performance Integrated Virtual Environment (HIVE). Database (Oxford). doi: 10.1093/database/bau022. Read the full article.
    Guo, S., Tan, L., Pu, W., Wu, J., Xu, K., Wu, J., Li, Q., Ma, Y., Xu, J., Jin, L., et al. (2014) Quantitative assessment of the diagnostic role of APC promoter methylation in non-small cell lung cancer. Clin Epigenetics. 6(1):5. Read the full article.
    Gerber, N.K., Goenka, A., Turcan, S., Reyngold, M., Makarov, V., Kannan, K., Beal, K., Omuro, A., Yamada, Y., Gutin, P., et al. (2014) Transcriptional diversity of long-term glioblastoma survivors. Neuro Oncol. doi: 10.1093/neuonc/nou043. View PubMed abstract.
    Kim, J., Lee, Y., Cho, H.J., Lee, Y.E., An, J., Cho, G.H., Ko, Y.H., Joo, K.M., and Nam, D.H. (2014) NTRK1 fusion in glioblastoma multiforme. PLoS One. 9(3):e91940. Read the full article.
    Wang, C., Machiraju, R., and Huang, K. (2014) Breast cancer patient stratification using a molecular regularized consensus clustering method. Methods. doi: 10.1016/j.ymeth.2014.03.005. View PubMed abstract.
    McCloskey, C.W., Goldberg, R.L., Carter, L.E., Gamwell, L.F., Al-Hujaily, E.M., Collins, O., Macdonald, E.A., Garson, K., Daneshmand, M., Carmona, E., et al. (2014) A new spontaneously transformed syngeneic model of high-grade serous ovarian cancer with a tumor-initiating cell population. Front Oncol. 4:53. Read the full article.
    Sonabend, A.M., Carminucci, A.S., Amendolara, B., Bansal, M., Leung, R., Lei, L., Realubit, R., Li, H., Karan, C., Yun, J., et al. (2014) Convection-enhanced delivery of etoposide is effective against murine proneural glioblastoma. Neuro Oncol. doi: 10.1093/neuonc/nou026. .
    Feng, Y., Wang, Z., Bao, Z., Yan, W., You, G., Wang, Y., Hu, H., Zhang, W., Zhang, Q., and Jiang, T. (2014) SOCS3 promoter hypermethylation is a favorable prognosticator and a novel indicator for G-CIMP-positive GBM patients. PLoS One. 9(3):e91829. Read the full article.
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