• National Cancer Institute
  • National Human Genome Research Institute

PublicationsRSS

All data generated by The Cancer Genome Atlas (TCGA) Research Network are made open to the public through the Data Coordinating Center and the TCGA Data Portal. The following is a growing list of publications from the TCGA Research Network (designated with an *) and from other investigators who have successfully leveraged the TCGA data for their own work.


    Jacob, F., Hitchins, M.P., Fedier, A., Brennan, K., Nixdorf, S., Hacker, N.F., Ward, R. and Heinzelmann-Schwarz, V.A. (2014) Expression of GBGT1 is epigenetically regulated by DNA methylation in ovarian cancer cells. BMC Mol Biol. doi:10.1186/1471-2199-15-24. Read the full article.
    Jacob, F., Hitchins, M.P., Fedier, A., Brennan, K., Nixdorf, S., Hacker, N.F., Ward, R., and Heinzelmann-Schwarz, V.A. (2014) Expression of GBGT1 is epigenetically regulated by DNA methylation in ovarian cancer cells. BMC Mol Biol. doi: 10.1186/1471-2199-15-24. Read the full article.
    Li, Y., Liang, C., Easterbrook, S., Luo, J and Zhang, Z. (2014) Investigating the functional implications of reinforcing feedback loops in transcriptional regulatory networks. Mol Biosyst. doi: 10.1039/C4MB00526K. View PubMed abstract.
    Martin, E.C., Rhodes, L.V., Elliott, S., Krebs, A.E., Nephew, K.P., Flemington, E.K., Collins-Buruow, B.M. and Burow, M.E. (2014) microRNA regulation of mammalian target of rapamycin expression and activity controls estrogen receptor function and RAD001 sensitivity. Mol Cancer. doi:10.1186/1476-4598-13-229. Read the full article.
    Sepiashvili, L., Waggot, D., Hui, A., Shi, W., Su, S., Ignatchenko, A., Ignatchenko, V., Laureano, M., Huang, S.H., et al. (2014) Integrated omic analysis of oropharyngeal carcinomas reveals HPV-dependent regulation of the AP-1 pathway. Mol Cell Proteomics. doi:10.1074/mcp.M114.041764. Read the full article.
    Yao, L. Tak, Y.G., Berman, B.P., and Farnham, P.J. (2014) Functional annotation of colon cancer risk SNPs. Nat Comm. doi: 10.1038/ncomms6114. Read the full article.
    Dong, Y., Van Tine, B.A., Oyama, T., Wang, P.I., Cheng, E.H., and Hsieh, J.J. (2014) Taspase1 cleaves MLL1 to activate cyclin E for HER2/neu breast tumorigenesis. Cell Res. doi: 10.1038/cr.2014.129. Read the full article.
    Kim, M.H., Bae, J.S., Lim, D.J., Lee, H., Jeon, S.R., Park, G.S. and Jung, C.K. (2014) Quantification of BRAF V600E alleles predicts papillary thyroid cancer progression. Endocr Relat Cancer. doi:10.1530/ERC-14-0147. View PubMed abstract.
    Saddiki, H., McAuliffe, J. and Flaherty, P. (2014) GLAD: A mixed-membership model for heterogeneous tumor subtype classification. Bioinformatics. doi:10.1093/bioinformatics/btu618. Read the full article.
    Huang, C.T., Oyang, Y.J., Huang, H.C. and Juan, H.F. (2014) MicroRNA-mediated networks underlie immune response regulation in papillary thyroid carcinoma. Sci Rep. doi: 10.1038/srep06495. Read the full article.
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