PublicationsRSS

All data generated by The Cancer Genome Atlas (TCGA) Research Network are made open to the public through the Data Coordinating Center and the TCGA Data Portal. The following is a growing list of publications from the TCGA Research Network (designated with an *) and from other investigators who have successfully leveraged the TCGA data for their own work.


    Haan, J.C., Labots, M., Rausch, C., Koopman, M., Tol, J., Mekenkamp, L.J., van de Wiel, M.A., Israeli, D., van Essen, H.F., et al. (2014) Genomic landscape of metastatic colorectal cancer. Nat Commun. doi: 10.1038/ncomms6457. Read the full article.
    * The Cancer Genome Atlas Network (2014) Integrated genomic characterization of papillary thyroid carcinoma. Cell. doi: 10.1016/j.cell.2014.09.050. Read the full article.
    Yao, L. Tak, Y.G., Berman, B.P., and Farnham, P.J. (2014) Functional annotation of colon cancer risk SNPs. Nat Comm. doi: 10.1038/ncomms6114. Read the full article.
    Dong, Y., Van Tine, B.A., Oyama, T., Wang, P.I., Cheng, E.H., and Hsieh, J.J. (2014) Taspase1 cleaves MLL1 to activate cyclin E for HER2/neu breast tumorigenesis. Cell Res. doi: 10.1038/cr.2014.129. Read the full article.
    Weinhold, N., Jacobsen, A., Schultz, N., Sander, C. and Lee, W. (2014) Genome-wide analysis of noncoding regulatory mutations in cancer. Nat Genet. doi: 10.1038/ng.3101. View PubMed abstract.
    Phipson, B. and Oshlack, A. (2014) DiffVar: a new method for detecting differential variability with application to methylation in cancer and aging. Genome Biol. doi:10.1186/s13059-014-0465-4. Read the full article.
    Stransky, N., Cerami, E., Schalm, S., Kim, J.L. and Lengauer, C. (2014) The landscape of kinase fusions in cancer. Nat Commun. doi: 10.1038/ncomms5846. Read the full article.
    Liu, Y., Patel, L., Mills, G.B., Lu, K.H., Sood, A.K., Ding, L., Kucherlapati, R., Mardis, E.R., Levine, D.A., et al. (2014) Knowledge-driven genomic interactions: an application in ovarian cancer. J Natl Cancer Inst. doi: 10.1093/jnci/dju245. Read the full article.
    Davis, C.F., Ricketts, C.J., Wang, M., Yang, L., Cherniack, A.D., Shen, H., Buhay, C., Kang, H., Kim, S.C., et al (2014) The somatic genomic landscape of chromophobe renal cell carcinoma. Cancer Cell. doi: 10.1016/j.ccr.2014.07.014. Read the full article.
    Osmanbeyoglu, H.U., Pelossof, R., Bromberg, J. and Leslie, C.S. (2014) Linking signaling pathways to transcriptional programs in breast cancer. Genome Res. doi:10.1101/gr.173039.114. Read the full article.
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