• National Cancer Institute
  • National Human Genome Research Institute


All data generated by The Cancer Genome Atlas (TCGA) Research Network are made open to the public through the Data Coordinating Center and the TCGA Data Portal. The following is a growing list of publications from the TCGA Research Network (designated with an *) and from other investigators who have successfully leveraged the TCGA data for their own work.

    Zhang, J., Jiang, K., Shen, Z., Gao, Z., Lv, L., Ye, Y. and Wang, S. (2014) Expression QTL-based analyses reveal the mechanisms underlying colorectal cancer predisposition. Tumour Biol. doi: 10.1007/s13277-014-2583-8. Read the full article.
    Stransky, N., Cerami, E., Schalm, S., Kim, J.L. and Lengauer, C. (2014) The landscape of kinase fusions in cancer. Nat Commun. doi: 10.1038/ncomms5846. Read the full article.
    Davis, C.F., Ricketts, C.J., Wang, M., Yang, L., Cherniack, A.D., Shen, H., Buhay, C., Kang, H., Kim, S.C., et al (2014) The somatic genomic landscape of chromophobe renal cell carcinoma. Cancer Cell. doi: 10.1016/j.ccr.2014.07.014. Read the full article.
    Li, Y.R., Xian, R.R., Ziober, A., Conejo-Garcia, J., Perales-Puchalt, A., June, C.H., Zhang, P.J. and Tchou, J. (2014) Mesothelin expression is associated with poor outcomes in breast cancer. Breast Cancer Res Treat. doi: 10.1007/s10549-014-3077-5. Read the full article.
    Xu, Y., Guo, X., Sun, J. and Zhao, Z. (2014) Snowball: resampling combined with distance-based regression to discover transcriptional consequences of a driver mutation. Bioinformatics. doi:10.1093/bioinformatics/btu603. Read the full article.
    Holmberg Olausson, K., Maire, C.L., Haidar, S., Ling, J., Nister, M. and Ligon, K.L. (2014) Prominin-1 (CD-133) defines both stem and non-stem cell populations in CNS development and gliomas. PLoS One. doi: 10.1371/journal.pone.0106694. .
    Bera, A., VenkataSubbaRao, K., Manoharan, M.S., Hill, P. and Freeman, J.W. (2014) A miRNA signature of chemoresistant mesenchymal phenotype identifies novel molecular targets associated with advanced pancreatic cancer. PLoS One. doi: 10.1371/journal.pone.0106343. Read the full article.
    Teoh, J.P., Park, K.M., Wang, Y., Hu, Q., Kim, S., Wu, G., Huang, S., Maihle, N. and Kim, I.M. (2014) Endothelin-1 Endothelin A receptor-mediated biased signaling is a new player in modulating human ovariancancer cell tumorigenesis. Cell Signal. doi: 10.1016/j.cellsig.2014.08.024. View PubMed abstract.
    Osmanbeyoglu, H.U., Pelossof, R., Bromberg, J. and Leslie, C.S. (2014) Linking signaling pathways to transcriptional programs in breast cancer. Genome Res. doi:10.1101/gr.173039.114. Read the full article.
    Zhous, J., Deng, Z., Chen, Y., Gao, Y., Wu, D., Zhu, G., Li, L., Song, W., Wang, X., et al (2014) Overexpression of FABP7 promotes cell growth and predicts poor prognosis of clear cell renal cell carcinoma. Urol Oncol. doi: 10.1016/j.urolonc.2014.08.001. Read the full article.
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