• National Cancer Institute
  • National Human Genome Research Institute

TCGA Research Network Publications

The following is a growing list of publications from the TCGA Research Network:

 

The Cancer Genome Atlas Research Network (2014) Comprehensive molecular characterization of urothelial bladder carcinoma. Nature. doi: 10.1038/nature12965. Read the full article

 

Brennan, C.W., Verhaak, R.G., McKenna, A., Campos, B., Noushmehr, H., Salama, S.R., Zheng, S., Chakravarty, D., Sanborn, J.Z., Berman, S.H., et al. (2013) The somatic genomic landscape of glioblastoma. Cell.155(2):462-477. View PubMed abstract | View associated data files

 

The Cancer Genome Atlas Research Network, Weinstein, J.N., Collisson, E.A., Mills, G.B., Shaw, K.R., Ozenberger, B.A., Ellrott, K., Shmulevich, I., Sander, C., and Stuart, J.M. (2013) The Cancer Genome Atlas Pan-Cancer analysis project. Nat Genet. 45(10):1113–1120. Read the full article

 

The Cancer Genome Atlas Research Network (2013) Comprehensive molecular characterization of clear cell renal cell carcinoma. Nature. 499(7456):43-49. Read the full article | View associated data files

 

The Cancer Genome Atlas Research Network (2013) Integrated genomic characterization of endometrial carcinoma. Nature. 497(7447):67-73. Read the full article | View associated data files

 

The Cancer Genome Atlas Network (2013) Genomic and epigenomic landscapes of adult de novo acute myeloid leukemia. N Engl J Med. 368:2059-2074. Read the full article | View associated data files

 

The Cancer Genome Atlas Network (2012) Comprehensive molecular portraits of human breast tumours. Nature. 490(7418):61-70. Read the full article | View associated data files

 

The Cancer Genome Atlas Research Network (2012) Comprehensive genomic characterization of squamous cell lung cancers. Nature. 489(7417):519-525. Read the full article | View associated data files

 

Larman, T.C., Depalma, S.R., Hadjipanayis, A.G., The Cancer Genome Atlas Research Network, Protopopov, A., Zhang, J., Gabriel, S.B., Chin, L., Seidman, C.E., Kucherlapati, R., et al. (2012) Spectrum of somatic mitochondrial mutations in five cancers. Proc Natl Acad Sci U S A. 109(35):14087-14091. Read the full article

 

Lee, E., Iskow, R., Yang, L., Gokcumen, O., Haseley, P., Luquette, L.J. 3rd., Lohr, J., Harris, C., Ding, L., Wilson, R., et al. (2012) Landscape of somatic retrotransposition in human cancers. Science. 337(6097):967-971. Read the full article

 

The Cancer Genome Atlas Research Network (2012) Comprehensive molecular characterization of human colon and rectal cancer. Nature. 487(7407):330-337. Read the full article | View associated data files

 

Creighton, C.J., Hernandez-Herrera, A., Jacobsen, A., Levine, D.A., Mankoo, P., Schultz, N., Du, Y., Zhang, Y., Larsson, E., Sheridan, R., et al. (2012) Integrated analyses of microRNAs demonstrate their widespread influence on gene expression in high-grade serous ovarian carcinoma. PLoS One. 7(3):e34546. Read the full article

 

Bolton, K.L., Chenevix-Trench, G., Goh, C., Sadetzki, S., Ramus, S.J., Karlan, B.Y., Lambrechts, D., Despierre, E., Barrowdale, D., McGuffog, L., et al. (2012) Association between BRCA1 and BRCA2 mutations and survival in women with invasive epithelial ovarian cancer. JAMA. 307(4):382-390. Read the full article

 

The Cancer Genome Atlas Research Network (2011) Integrated genomic analyses of ovarian carcinoma. Nature. 474(7353):609-615. View author manuscript | View associated data files

 

Noushmehr, H., Weisenberger, D.J., Diefes, K., Phillips, H.S., Pujara, K., Berman, B.P., Pan F., Pelloski, K.E., Suhmar, E.P., Bhat, K.P., et al. (2010) Identification of a CpG island methylator phenotype that defines a distinct subgroup of glioma. Cancer Cell. 17(5):510-522. View author manuscript | View associated data files

 

Verhaak, R.G., Hoadley, K.A., Purdom, E., Wang, V., Qi, Y., Wilkerson, M.D., Miller, C.R., Ding, L., Golub, T., Mesirov, J.P., Alexe, G., et al. (2010) Integrated genomic analysis identifies clinically relevant subtypes of glioblastoma characterized by abnormalities in PDGFRA, IDH1, EGFR, and NF1. Cancer Cell. 17(1):98-110.View author manuscript | View associated data files

 

The Cancer Genome Atlas Research Network. (2008) Comprehensive genomic characterization defines human glioblastoma genes and core pathways. Nature. 455(7216):1061-1068. View author manuscript | View associated data files