• National Cancer Institute
  • National Human Genome Research Institute

Publications

All data generated by The Cancer Genome Atlas (TCGA) Research Network are made open to the public through the Data Coordinating Center and the TCGA Data Portal.

The following is a growing list of publications from the TCGA Research Network (designated with an *) and from other investigators who have successfully leveraged the TCGA data for their own work. 

Information regarding Publication Guidelines is available here.

A complete list of publications from the TCGA Research Network is also available.

All data generated by The Cancer Genome Atlas (TCGA) Research Network are made open to the public through the Data Coordinating Center and the TCGA Data Portal.

View Publications by Cancer Type


* = TCGA Research Network

  • Fackler, M.J., Lopez Bujanda, Z., Umbricht, C., Teo, W.W., Cho, S., Zhang, Z., Visvanathan, K., Jeter, S., Argani, P., Wang, C., et al. (2014) Novel methylated biomarkers and a robust assay to detect circulating tumor DNA in metastatic breast cancer. Cancer Res. 74(8):2160-2170. View PubMed abstract
  • Sokhi, U.K., Bacolod, M.D., Emdad, L., Das, S.K., Dumur, C.I., Miles, M.F., Sarkar, D., and Fisher, P.B. (2014) Analysis of global changes in gene expression induced by human polynucleotide phosphorylase (hPNPaseold-35). J Cell Physiol. doi: 10.1002/jcp.24645. View PubMed abstract
  • Beltran, P.J., Calzone, F.J., Mitchell, P., Chung, Y.A., Cajulis, E., Moody, G., Belmontes, B., Li, C.M., Vonderfecht, S., Velculescu, V.E., et al. (2014) Ganitumab (AMG 479) inhibits IGF-2-dependent ovarian cancer growth and potentiates platinum-based chemotherapy. Clin Cancer Res. doi: 10.1158/1078-0432.CCR-13-3448. View PubMed abstract
  • Cooke, S.L., Shlien, A., Marshall, J., Pipinikas, C.P., Martincorena, I., Tubio, J.M., Li Y, Menzies, A., Mudie, L., Ramakrishna, M., et al. (2014) Processed pseudogenes acquired somatically during cancer development. Nat Commun. 5:3644. Read the full article
  • Mertins, P., Yang, F., Liu, T., Mani, D.R., Petyuk, V.A., Gillette, M.A., Clauser, K.R., Qiao, J.W., Gritsenko, M.A., Moore, R.J., et al. (2014) Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels. Mol Cell Proteomics. doi: 10.1074/mcp.M113.036392 mcp.M113.036392.. Read the full article
  • Qian, J., Kong, X., Deng, N., Tan, P., Chen, H., Wang, J., Li, Z., Hu, Y., Zou, W., Xu, J., et al. (2014) OCT1 is a determinant of synbindin-related ERK signalling with independent prognostic significance in gastric cancer. Gut. doi: 10.1136/gutjnl-2013-306584. Read the full article
  • Mountzios, G., Rampias, T., and Psyrri, A. (2014) The mutational spectrum of squamous-cell carcinoma of the head and neck: targetable genetic events and clinical impact. Ann Oncol. doi: 10.1093/annonc/mdu143. Read the full article
  • Ngeow, J., Ni, Y., Tohme, R., Song Chen, F., Bebek, G., and Eng, C. (2014) Germline alterations in RASAL1 in Cowden syndrome patients presenting with follicular thyroid cancer and in individuals with apparently sporadic epithelial thyroid cancer. J Clin Endocrinol Metab. doi: http://dx.doi.org/10.1210/jc.2014-1225. View PubMed abstract
  • de Souza, J.E., Fonseca, A.F., Valieris, R., Carraro, D.M., Wang, J.Y., Kolodner, R.D., and de Souza, S.J. (2014) S-score: a scoring system for the identification and prioritization of predicted cancer genes. PLoS One. 9(4):e94147. Read the full article
  • Heim, D., Budczies, J., Stenzinger, A., Treue, D., Hufnagl, P., Denkert, C., Dietel, M., and Klauschen, F. (2014) Cancer beyond organ and tissue specificity: next-generation-sequencing gene mutation data reveal complex genetic similarities across major cancers. Int J Cancer. doi: 10.1002/ijc.28882. View PubMed abstract
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