• National Cancer Institute
  • National Human Genome Research Institute

The Cancer Genome Atlas

Publications

All data generated by The Cancer Genome Atlas (TCGA) Research Network are made open to the public through the Data Coordinating Center and the TCGA Data Portal. The following is a growing list of publications from the TCGA Research Network (designated with an *) and from other investigators who have successfully leveraged the TCGA data for their own work.

All data generated by The Cancer Genome Atlas (TCGA) Research Network are made open to the public through the Data Coordinating Center and the TCGA Data Portal.

View Publications by Cancer Type


* = TCGA Research Network

  • Swartling, F.J., Hede, S.M. and Weiss, W.A. (2013) What underlies the diversity of brain tumors?. Cancer Metastasis Rev. 32(1-2):5-24. View PubMed abstract
  • Rachidi, S.M., Qin, T., Sun, S., Zheng, W.J. and Li, Z. (2013) Molecular profiling of multiple human cancers defines an inflammatory cancer-associated molecular pattern and uncovers KPNA2 as a uniform poor prognostic cancer marker. PLoS One. 8(3):e57911. Read the full article
  • Delfino, K.R. and Rodriguez-Zas, S.L. (2013) Transcription factor-microRNA-target gene networks associated with ovarian cancer survival and recurrence. PLoS One. 8(3):e58608. Read the full article
  • Bao, Z.S., Zhang, C.B., Wang, H.J., Yan, W., Liu, Y.W., Li, M.Y. and Zhang, W. (2013) Whole-genome mRNA expression profiling identifies functional and prognostic signatures in patients with mesenchymal glioblastoma multiforme. CNS Neurosci Ther. doi: 10.1111/cns.12118 . View PubMed abstract
  • Strong, M.J., Xu, G., Coco, J., Baribault, C., Vinay, D.S., Lacey, M.R., Strong, A.L., Lehman, T.A., Seddon, M.B., Lin, Z., et al. (2013) Differences in gastric carcinoma microenvironment stratify according to EBV infection intensity: implications for possible immune adjuvant therapy. PLoS Pathog. 9(5):e1003341. Read the full article
  • Gramatzki, D., Herrmann, C., Happold, C., Becker, K.A., Gulbins, E., Weller, M. and Tabatabai, G. (2013) Glioma cell death induced by irradiation or alkylating agent chemotherapy is independent of the intrinsic ceramide pathway. PLoS One. 8(5):e63527. Read the full article
  • * The Cancer Genome Atlas Research Network (2013) Integrated genomic characterization of endometrial carcinoma. Nature. 497(7447):67-73. Read the full article | View associated data files
  • Gutman, D.A., Cooper, L.A., Hwang, S.N., Holder, C.A., Gao, J., Aurora, T.D., Dunn, W.D. Jr., Scarpace, L., Mikkelsen, T., Jain, R., et al. (2013) MR imaging predictors of molecular profile and survival: multi-institutional study of the TCGA glioblastoma data set. Radiology. 267(2):560-569. View PubMed abstract
  • Ibragimova, I., Maradeo, M.E., Dulaimi, E. and Cairns, P. (2013) Aberrant promoter hypermethylation of PBRM1, BAP1, SETD2, KDM6A and other chromatin-modifying genes is absent or rare in clear cell RCC. Epigenetics. 8(5):486-493. View PubMed abstract
  • Kreth, S., Limbeck, E., Hinske, L.C., Schütz SV, Thon, N., Hoefig, K., Egensperger, R. and Kreth, F.W. (2013) In human glioblastomas transcript elongation by alternative polyadenylation and miRNA targeting is a potent mechanism of MGMT silencing. Acta Neuropathol. 125(5):671-681. View PubMed abstract
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